macapype.pipelines.surface.create_nii_to_mesh_fs_pipe¶
- macapype.pipelines.surface.create_nii_to_mesh_fs_pipe(params, name='nii_to_mesh_fs_pipe')[source]¶
Description: surface generation using freesurfer tools
Params:
fill_wm (see MRIFill) - also available as indiv_params
Inputs:
inputnode:
- wm_mask_file:
segmented white matter mask (binary) in template space
- reg_brain_file:
preprocessd T1, registered to template
- indiv_params (opt):
dict with individuals parameters for some nodes
arguments:
- params:
dictionary of node sub-parameters (from a json file)
- name:
pipeline name (default = “nii_to_mesh_fs_pipe”)
Outputs: